b10fccf6-5ec9-4665-936f-349cab0ca8ed

Committed 28 Oct 2025 02:06PM UTC coverage: 87.382% (-3.9%) from 91.294%

Build # b10fccf6-5ec9-4665-936f-349cab0ca8ed

Build Type

Pull #2057

circleci

Committed by

hectorcorrea

Commit Message

Force a change

Pull Request Pull Request #2057: Dashboard displays projects straights from Mediaflux

Run Details

49 of 69 new or added lines in 4 files covered. (71.01%)

930 existing lines in 39 files now uncovered.

2694 of 3083 relevant lines covered (87.38%)

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89.26

/app/controllers/projects_controller.rb

# frozen_string_literal: true
class ProjectsController < ApplicationController

  before_action :set_breadcrumbs
  before_action :authenticate_user!

  def details
    return if project.blank?

    add_breadcrumb(project.title, project_path)
    add_breadcrumb("Details")

    @departments = project.departments.join(", ")
    @project_metadata = project.metadata_model

    @data_sponsor = User.find_by(uid: @project_metadata.data_sponsor)
    @data_manager = User.find_by(uid: @project_metadata.data_manager)

    read_only_uids = @project_metadata.ro_users
    data_read_only_users = read_only_uids.map { |uid| ReadOnlyUser.find_by(uid:) }.reject(&:blank?)

    read_write_uids = @project_metadata.rw_users
    data_read_write_users = read_write_uids.map { |uid| User.find_by(uid:) }.reject(&:blank?)

    unsorted_data_users = data_read_only_users + data_read_write_users
    sorted_data_users = unsorted_data_users.sort_by { |u| u.family_name || u.uid }
    @data_users = sorted_data_users.uniq { |u| u.uid }
    user_model_names = @data_users.map(&:display_name_safe)
    @data_user_names = user_model_names.join(", ")

    @provenance_events = project.provenance_events.where.not(event_type: ProvenanceEvent::STATUS_UPDATE_EVENT_TYPE)

    @project_eligible_to_edit = true if project.status == Project::APPROVED_STATUS && eligible_editor?

    @project_metadata = @project.metadata
    @project_id = @project_metadata[:project_id] || {}
    @storage_capacity = @project_metadata[:storage_capacity]
    @size = @storage_capacity[:size]
    @unit = @storage_capacity[:unit]

    @requested_size = @size[:requested]
    @requested_unit = @unit[:requested]

    @approved_size = @size[:approved]
    @approved_unit = @unit[:approved]

    @storage_expectations = @project_metadata[:storage_performance_expectations]
    @requested_storage_expectations = @storage_expectations[:requested]
    @approved_storage_expectations = @storage_expectations[:approved]

    @project_purpose = @project_metadata[:project_purpose]
    @number_of_files = @project_metadata[:number_of_files]
    @hpc = @project_metadata[:hpc]
    @smb = @project_metadata[:smb_request]
    @globus = @project_metadata[:globus_request]

    @project_session = "details"

    respond_to do |format|
      format.html do
        @project = ProjectShowPresenter.new(project)
      end
      format.json do
        render json: project.to_json
      end
      format.xml do
        render xml: project.to_xml
      end
    end
  end

  def index
    if current_user.eligible_sysadmin?
      search_projects
    else
      flash[:alert] = I18n.t(:access_denied)
      redirect_to dashboard_path
    end
  end

  def show

    return if project.blank?
    add_breadcrumb(project.title, project_path)
    add_breadcrumb("Contents")

    @latest_completed_download = current_user.user_requests.where(project_id: @project.id, state: "completed").order(:completion_time).last
    @storage_usage = project.storage_usage(session_id: current_user.mediaflux_session)
    @storage_capacity = project.storage_capacity(session_id: current_user.mediaflux_session)

    @num_files = project.asset_count(session_id: current_user.mediaflux_session)

    @file_list = project.file_list(session_id: current_user.mediaflux_session, size: 100)
    @files = @file_list[:files]
    @files.sort_by!(&:path)
    @project = ProjectShowPresenter.new(project)

    @project_session = "content"
    respond_to do |format|
      format.html { render }
      format.xml { render xml: @project.to_xml }
    end
  end

  # GET "projects/:id/:id-mf"
  #
  # This action is used to render the mediaflux metadata for a project.
  def show_mediaflux
    project_id = params[:id]
    project = Project.find(project_id)
    respond_to do |format|
      format.xml do
        render xml: project.mediaflux_meta_xml(user: current_user)
      end
    end
  rescue => ex
    Rails.logger.error "Error getting MediaFlux XML for project #{project_id}, user #{current_user.uid}: #{ex.message}"
    flash[:alert] = "Error fetching Mediaflux XML for this project"
    redirect_to project_path(project_id)
  end

  def list_contents
    return if project.blank?

    project_job_service.list_contents_job(user: current_user)

    json_response = {
      message: "File list for \"#{project.title}\" is being generated in the background. A link to the downloadable file list will be available in the \"Recent Activity\" section of your dashboard when it is available. You may safely navigate away from this page or close this tab."
    }
    render json: json_response
  rescue => ex
    message = "Error producing document list (project id: #{project&.id}): #{ex.message}"
    Rails.logger.error(message)
    Honeybadger.notify(message)
    render json: { message: "Document list could not be generated." }
  end

  def file_list_download
    job_id = params[:job_id]
    user_request = FileInventoryRequest.where(job_id:job_id).first
    if user_request.nil?
      # TODO: handle error
      redirect_to "/"
    else
      filename = user_request.output_file
      send_data File.read(filename), type: "text/plain", filename: "filelist.csv", disposition: "attachment"
    end
  end

  private

    def project_job_service
      @project_job_service ||= ProjectJobService.new(project:)
    end


    def build_new_project
      @project ||= Project.new
    end

    def project
      @project ||= begin
        project = Project.find(params[:id])
        if project.user_has_access?(user: current_user)
          project
        else
          flash[:alert] = I18n.t(:access_denied)
          redirect_to dashboard_path
          nil
        end
      end
    end

    def eligible_editor?
      return true if current_user.eligible_sponsor? or current_user.eligible_manager?
    end

    def set_breadcrumbs
      add_breadcrumb("Dashboard",dashboard_path)
    end

    def search_projects
      @title_query = params[:title_query]
      if @title_query.blank?
        @projects = Project.all
        flash[:notice] = nil
      else
        result =  ProjectSearch.new.call(search_string: @title_query, requestor: current_user)
        if result.success?
          flash[:notice] = "Successful search in Mediaflux for #{@title_query}"
          @projects = result.value!
        else
          @projects = []
          flash[:notice] = "Error searching projects for #{@title_query}.  Error: #{result.failure}"
        end
      end
    end
end

1	# frozen_string_literal: true
UNCOV 2	class ProjectsController < ApplicationController	3✔
3
UNCOV 4	before_action :set_breadcrumbs	3✔
UNCOV 5	before_action :authenticate_user!	3✔
6
UNCOV 7	def details	3✔
8	return if project.blank?	5✔
9
10	add_breadcrumb(project.title, project_path)	4✔
11	add_breadcrumb("Details")	4✔
12
13	@departments = project.departments.join(", ")	4✔
14	@project_metadata = project.metadata_model	4✔
15
16	@data_sponsor = User.find_by(uid: @project_metadata.data_sponsor)	4✔
17	@data_manager = User.find_by(uid: @project_metadata.data_manager)	4✔
18
19	read_only_uids = @project_metadata.ro_users	4✔
20	data_read_only_users = read_only_uids.map { \|uid\| ReadOnlyUser.find_by(uid:) }.reject(&:blank?)	4✔
21
22	read_write_uids = @project_metadata.rw_users	4✔
23	data_read_write_users = read_write_uids.map { \|uid\| User.find_by(uid:) }.reject(&:blank?)	4✔
24
25	unsorted_data_users = data_read_only_users + data_read_write_users	4✔
26	sorted_data_users = unsorted_data_users.sort_by { \|u\| u.family_name \|\| u.uid }	4✔
27	@data_users = sorted_data_users.uniq { \|u\| u.uid }	4✔
28	user_model_names = @data_users.map(&:display_name_safe)	4✔
29	@data_user_names = user_model_names.join(", ")	4✔
30
31	@provenance_events = project.provenance_events.where.not(event_type: ProvenanceEvent::STATUS_UPDATE_EVENT_TYPE)	4✔
32
33	@project_eligible_to_edit = true if project.status == Project::APPROVED_STATUS && eligible_editor?	4✔
34
35	@project_metadata = @project.metadata	4✔
36	@project_id = @project_metadata[:project_id] \|\| {}	4✔
37	@storage_capacity = @project_metadata[:storage_capacity]	4✔
38	@size = @storage_capacity[:size]	4✔
39	@unit = @storage_capacity[:unit]	4✔
40
41	@requested_size = @size[:requested]	4✔
42	@requested_unit = @unit[:requested]	4✔
43
44	@approved_size = @size[:approved]	4✔
45	@approved_unit = @unit[:approved]	4✔
46
47	@storage_expectations = @project_metadata[:storage_performance_expectations]	4✔
48	@requested_storage_expectations = @storage_expectations[:requested]	4✔
49	@approved_storage_expectations = @storage_expectations[:approved]	4✔
50
51	@project_purpose = @project_metadata[:project_purpose]	4✔
52	@number_of_files = @project_metadata[:number_of_files]	4✔
53	@hpc = @project_metadata[:hpc]	4✔
54	@smb = @project_metadata[:smb_request]	4✔
55	@globus = @project_metadata[:globus_request]	4✔
56
57	@project_session = "details"	4✔
58
59	respond_to do \|format\|	4✔
60	format.html do	4✔
61	@project = ProjectShowPresenter.new(project)	1✔
UNCOV 62	end
63	format.json do	4✔
64	render json: project.to_json	2✔
UNCOV 65	end
66	format.xml do	4✔
67	render xml: project.to_xml	1✔
UNCOV 68	end
UNCOV 69	end
UNCOV 70	end
71
UNCOV 72	def index	3✔
73	if current_user.eligible_sysadmin?	4✔
74	search_projects	3✔
UNCOV 75	else
76	flash[:alert] = I18n.t(:access_denied)	1✔
77	redirect_to dashboard_path	1✔
UNCOV 78	end
UNCOV 79	end
80
UNCOV 81	def show	3✔
82
UNCOV 83	return if project.blank?	9✔
UNCOV 84	add_breadcrumb(project.title, project_path)	8✔
UNCOV 85	add_breadcrumb("Contents")	8✔
86
UNCOV 87	@latest_completed_download = current_user.user_requests.where(project_id: @project.id, state: "completed").order(:completion_time).last	8✔
UNCOV 88	@storage_usage = project.storage_usage(session_id: current_user.mediaflux_session)	8✔
UNCOV 89	@storage_capacity = project.storage_capacity(session_id: current_user.mediaflux_session)	4✔
90
UNCOV 91	@num_files = project.asset_count(session_id: current_user.mediaflux_session)	4✔
92
UNCOV 93	@file_list = project.file_list(session_id: current_user.mediaflux_session, size: 100)	4✔
UNCOV 94	@files = @file_list[:files]	4✔
UNCOV 95	@files.sort_by!(&:path)	4✔
UNCOV 96	@project = ProjectShowPresenter.new(project)	4✔
97
UNCOV 98	@project_session = "content"	4✔
UNCOV 99	respond_to do \|format\|	4✔
UNCOV 100	format.html { render }	6✔
UNCOV 101	format.xml { render xml: @project.to_xml }	6✔
UNCOV 102	end
UNCOV 103	end
104
105	# GET "projects/:id/:id-mf"
106	#
107	# This action is used to render the mediaflux metadata for a project.
UNCOV 108	def show_mediaflux	3✔
UNCOV 109	project_id = params[:id]	4✔
UNCOV 110	project = Project.find(project_id)	4✔
UNCOV 111	respond_to do \|format\|	3✔
UNCOV 112	format.xml do	3✔
UNCOV 113	render xml: project.mediaflux_meta_xml(user: current_user)	3✔
UNCOV 114	end
UNCOV 115	end
UNCOV 116	rescue => ex
UNCOV 117	Rails.logger.error "Error getting MediaFlux XML for project #{project_id}, user #{current_user.uid}: #{ex.message}"	1✔
UNCOV 118	flash[:alert] = "Error fetching Mediaflux XML for this project"	1✔
UNCOV 119	redirect_to project_path(project_id)	1✔
UNCOV 120	end
121
UNCOV 122	def list_contents	3✔
123	return if project.blank?	2✔
124
125	project_job_service.list_contents_job(user: current_user)	1✔
126
UNCOV 127	json_response = {
128	message: "File list for \"#{project.title}\" is being generated in the background. A link to the downloadable file list will be available in the \"Recent Activity\" section of your dashboard when it is available. You may safely navigate away from this page or close this tab."	1✔
UNCOV 129	}
130	render json: json_response	1✔
UNCOV 131	rescue => ex
132	message = "Error producing document list (project id: #{project&.id}): #{ex.message}"	×
133	Rails.logger.error(message)	×
134	Honeybadger.notify(message)	×
135	render json: { message: "Document list could not be generated." }	×
UNCOV 136	end
137
UNCOV 138	def file_list_download	3✔
139	job_id = params[:job_id]	×
140	user_request = FileInventoryRequest.where(job_id:job_id).first	×
141	if user_request.nil?	×
142	# TODO: handle error
143	redirect_to "/"	×
UNCOV 144	else
145	filename = user_request.output_file	×
146	send_data File.read(filename), type: "text/plain", filename: "filelist.csv", disposition: "attachment"	×
UNCOV 147	end
UNCOV 148	end
149
UNCOV 150	private	3✔
151
UNCOV 152	def project_job_service	3✔
153	@project_job_service \|\|= ProjectJobService.new(project:)	1✔
UNCOV 154	end
155
156
UNCOV 157	def build_new_project	3✔
158	@project \|\|= Project.new	×
UNCOV 159	end
160
UNCOV 161	def project	3✔
UNCOV 162	@project \|\|= begin	74✔
UNCOV 163	project = Project.find(params[:id])	14✔
UNCOV 164	if project.user_has_access?(user: current_user)	14✔
UNCOV 165	project	11✔
UNCOV 166	else
167	flash[:alert] = I18n.t(:access_denied)	3✔
168	redirect_to dashboard_path	3✔
169	nil	3✔
UNCOV 170	end
UNCOV 171	end
UNCOV 172	end
173
UNCOV 174	def eligible_editor?	3✔
175	return true if current_user.eligible_sponsor? or current_user.eligible_manager?	3✔
UNCOV 176	end
177
UNCOV 178	def set_breadcrumbs	3✔
UNCOV 179	add_breadcrumb("Dashboard",dashboard_path)	28✔
UNCOV 180	end
181
UNCOV 182	def search_projects	3✔
183	@title_query = params[:title_query]	3✔
184	if @title_query.blank?	3✔
185	@projects = Project.all	1✔
186	flash[:notice] = nil	1✔
UNCOV 187	else
188	result = ProjectSearch.new.call(search_string: @title_query, requestor: current_user)	2✔
189	if result.success?	2✔
190	flash[:notice] = "Successful search in Mediaflux for #{@title_query}"	2✔
191	@projects = result.value!	2✔
UNCOV 192	else
193	@projects = []	×
194	flash[:notice] = "Error searching projects for #{@title_query}. Error: #{result.failure}"	×
UNCOV 195	end
UNCOV 196	end
UNCOV 197	end
UNCOV 198	end

pulibrary / tigerdata-app / b10fccf6-5ec9-4665-936f-349cab0ca8ed

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